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The Crew Health System (CHeCS) plays a pivotal role in monitoring the life-support activities that maintain space station environmental quality and crew safety. Sampling hardware will be used in specific protocols to monitor the microbial dynamics of the closed spacecraft environment. NASA flight experience, ground-based studies, consultations with clinical and environmental microbiologists, and panel discussions with experts in engineering, flight-crew operations, microbiology, toxicology, and water quality systems all have been integral to the revision of in-flight microbial standards. The new standards for air and internal surfaces differentiate between bacterial and fungal loads, unlike previous standards that relied on total microbial counts. Microorganisms that must not be present in air or water or on surfaces also are listed.

With the restructure and funding changes for Space Station Freedom, the Environmental Health System (EHS)/Microbiology Subsystem revised its scheduling and operational requirements for component hardware. The function of the Microbiology Subsystem is to monitor the environmental quality of air, water, and internal surfaces and, in part, crew health on board Space Station. Its critical role shall be the identification of microbial contaminants in the environment that may cause system degradation, produce unsanitary or pathogenic conditions, or reduce crew and mission effectiveness. EHS/Microbiology operations and equipment shall be introduced in concert with a phased assembly sequence, from Man Tended Capability (MTC) through Permanently Manned Capability (PMC). Effective Microbiology operations and subsystem components will assure a safe, habitable, and useful spacecraft environment for life sciences research and long-term manned exploration.

Weightlessness, cosmic radiation and other space flight related conditions may adversely impact the physiology and immune status of the crew. Since microorganisms will surely be present in space habitats, the effects of space on microbial metabolic and physiologic functions will depend upon environmental conditions, types of organisms, and the duration of the flight. Because humans will conduct long-duration space missions, space microbiology must address the effect of alterations in microbial function during space flight. Even innocuous microorganisms and endogenous flora may become etiologic agents for disease during long missions. The microbial population in the closed environments of spacecraft may also become a source of toxic metabolites or the biodegradation of materials. This paper reviews studies concerning microbial behavior in closed environments, simulated microgravity, and actual space flight.